SNP Profiles matching GU 171/C

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 Key

 1234567891011121314
_Input profile
TTAATTCCGGTTAAAACCGGGGGGCCAA
1._RUQ_1068
TTCCTTCCGGTTAAAACCGGGGGGCCAA
2._RUQ_768
TTACTTCCGGTTAAAACCGGGGGGCCAA
3._RUQ_200
TTACTTCCGGTTAAAACCGGGGGGCCAA
4._RUQ_203
TTACTTCCGGTTAAAACCGGGGGGCCAA
5._RUQ_230
TTACTTCCGGTTAAAACCGGGGGGCCAA
6._RUQ_816
TTAATTCCGGTTAAAACCGGGGGGCCAA
7._RUQ_223
TTAATTCCGGTTAAAACCGGGGGGCCAA
8._RUQ_1070
TTAATTCCGGTTAAAACCGGGGGGCCAA
9._RUQ_1543
TTAATTCCGGTTAAAACCGGGGGGCCAA
10._RUQ_187
TTCCTTCCGGTTAAAACCGGGGGGCCAA
11._RUQ_815
TTACTTCCGGTTAAAACCGGGGGGCCAA
12._RUQ_406
TTCCTTCCGGTTAACCCCGGGGGGCCAA
 1516171819202122232425262728
_Input profile
GGAACTCCCTAACCAACCCCCCGGCCAA
1._RUQ_1068
GG_TTCCTTAGCCAACCCCCCGGCCAA
2._RUQ_768
GGAATTCCCTAGCCATCCCCCTAGCCAG
3._RUQ_200
GGAACTACCTAGCCATACCCCTAGCCAA
4._RUQ_203
GGAATTACCCAACCATCCCCCTGGCCAA
5._RUQ_230
GGAACTACCTAACCATACCCCTGGCCAA
6._RUQ_816
GGAATTACCCAACCAAACCC_AGCCAA
7._RUQ_223
GGAATTCCCCAGCCTTCCCCTTGGCCAA
8._RUQ_1070
AGAATTACCCAACCATCCCCCTAGCCAA
9._RUQ_1543
AGAACTCCCCAACCAAAC_CCGGCCAA
10._RUQ_187
GGAATTACCCAGCCATCCCCCTGGCCAA
11._RUQ_815
GGAATTCCCCAACCATCCCCCTAACCAA
12._RUQ_406
AAAATTAACCAACCAACCCCCCGGCCAA
 2930313233343536373839404142
_Input profile
CCCCGGAACTTTAAAACCGGGGCCAACC
1._RUQ_1068
CCCCGGAACTTTAAAACCGGGGCC_CC
2._RUQ_768
CCCCGGAACTTTAAAACCGGGGCCAACC
3._RUQ_200
CCCCGGAATTTTAAAACCGGGGCCAACC
4._RUQ_203
CCCCGGAATTTTAAAACCGGGGCCAACC
5._RUQ_230
CCCCGGAACTTTAAAACCGGGGCCGGCC
6._RUQ_816
CCCC_AACTTTAAAACCGGGGCCGGCC
7._RUQ_223
CCCCGGAACTTTAAAACCGGGGCCAGCC
8._RUQ_1070
CCCCGGAATTTTAAAACCGGGGCCGGCC
9._RUQ_1543
CCCCGGAATTTTAAAATTGGGGCCGGCC
10._RUQ_187
CCCCGGAACCTTAAAACCGGGGCCAACC
11._RUQ_815
CCCCGGAACTTTAAAACTGGGGCCAACC
12._RUQ_406
CCCCGGAACCTTAAAACCGGGGCCAACC
 4344454647484950515253545556
_Input profile
CCAAGGTTCCTTAATTGGAAGGGGTTAA
1._RUQ_1068
_AAGGTTCC_AATTGGAAGGGGTTAA
2._RUQ_768
CTAAGGCTCCTTAATTGGAAGGGGTTAA
3._RUQ_200
CCAAGGTTCCGTAATTGGAAGGGGTTAA
4._RUQ_203
CCAAGGTTCCGGAATTGGAAGGGGTTAA
5._RUQ_230
CTAAGGTTCCTTAATTGGAAGGCGTTAA
6._RUQ_816
CTAAGGTTCCTTAATTGGAAGGCGTTAA
7._RUQ_223
TTAAGGTTCCTTAATTGGAAGGGGTTAA
8._RUQ_1070
CCAAGGTTCCTTAATTGGAAGGGGTTAA
9._RUQ_1543
CCAAGGTTCCGTAATTGGAAGGCGTTAA
10._RUQ_187
CCAAGGTTCCGGAATTGGAAGGGGTTAA
11._RUQ_815
CTAAGGTTCCGGAATTGGAAGGGGTTAA
12._RUQ_406
CCAAGGTTCCTTAATTGGAAGGGGTTAA

Input profile: GU_171_/C RUQ_195

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._GU_123_/V RUQ_1068

95.2 %
52 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._GU_219_/F RUQ_768

92 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._GU_221_/C RUQ_200

92 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

4._GU_259_/C RUQ_203

92 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

5._GU_296_/H RUQ_230

92 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

6._GU_322_/P RUQ_816

91.7 %
54 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

7._GU_168_/H RUQ_223

91.1 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

8._GU_226_/V RUQ_1070

91.1 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

9._GU_183_/G RUQ_1543

90.9 %
55 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

10._GU_123_/V RUQ_187

90.2 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

11._GU_310_/P RUQ_815

90.2 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

12._KER_3 RUQ_406

90.2 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

 


  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP33 4TcSNP49 5TcSNP52
6TcSNP131 7TcSNP143 8TcSNP144 9TcSNP176 10TcSNP189
11TcSNP194 12TcSNP230 13TcSNP290 14TcSNP305 15TcSNP329
16TcSNP363 17TcSNP421 18TcSNP519 19TcSNP522 20TcSNP546
21TcSNP577 22TcSNP589 23TcSNP591 24TcSNP602 25TcSNP640
26TcSNP642 27TcSNP644 28TcSNP645 29TcSNP660 30TcSNP702
31TcSNP723 32TcSNP731 33TcSNP739 34TcSNP800 35TcSNP823
36TcSNP835 37TcSNP836 38TcSNP872 39TcSNP899 40TcSNP945
41TcSNP998 42TcSNP999 43TcSNP1010 44TcSNP1019 45TcSNP1062
46TcSNP1112 47TcSNP1144 48TcSNP1205 49TcSNP1230 50TcSNP1253
51TcSNP1275 52TcSNP1401 53TcSNP1404 54TcSNP1458 55TcSNP1524
56TcSNP1527